False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a numerical approach to investigate the random appearance of functional motifs with the aim of addressing biological questions such as: How are organisms protected from undesirable occurrences of motifs otherwise selected for their functionality? Has the random appearance of functional motifs in protein sequences been affected during evolution?

Via, A., Gherardini, P., Ferraro, E., Ausiello, G., SCALIA TOMBA, G., HELMER CITTERICH, M. (2007). False occurrences of functional motifs in protein sequences highlight evolutionary constraints. BMC BIOINFORMATICS, 8(1), 68 [10.1186/1471-2105-8-68].

False occurrences of functional motifs in protein sequences highlight evolutionary constraints

Gherardini, PF;AUSIELLO, GABRIELE;SCALIA TOMBA, GIANPAOLO;HELMER CITTERICH, MANUELA
2007-03-01

Abstract

False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a numerical approach to investigate the random appearance of functional motifs with the aim of addressing biological questions such as: How are organisms protected from undesirable occurrences of motifs otherwise selected for their functionality? Has the random appearance of functional motifs in protein sequences been affected during evolution?
1-mar-2007
Pubblicato
Rilevanza internazionale
Articolo
Sì, ma tipo non specificato
Settore BIO/11 - BIOLOGIA MOLECOLARE
English
Con Impact Factor ISI
Evolution, Molecular; Proteome; Sequence Analysis, Protein; Genetic Variation; Amino Acid Motifs; Molecular Sequence Data; Sequence Alignment; Amino Acid Sequence; False Positive Reactions
http://www.biomedcentral.com/1471-2105/8/68
Via, A., Gherardini, P., Ferraro, E., Ausiello, G., SCALIA TOMBA, G., HELMER CITTERICH, M. (2007). False occurrences of functional motifs in protein sequences highlight evolutionary constraints. BMC BIOINFORMATICS, 8(1), 68 [10.1186/1471-2105-8-68].
Via, A; Gherardini, P; Ferraro, E; Ausiello, G; SCALIA TOMBA, G; HELMER CITTERICH, M
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/15215
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