Simulating electronic properties and spectral signals requires robust computational approaches that need tuning with the system’s peculiarities. In this paper, we test implicit and fully atomistic solvation models for the calculation of UV-vis and electronic circular dichroism (ECD) spectra of two pharmaceutically relevant molecules, namely, (2S)-captopril and (S)-naproxen, dissolved in aqueous solution. Room temperature molecular dynamics simulations reveal that these two drugs establish strong contacts with the surrounding solvent molecules via hydrogen bonds. Such specific interactions, which play a major role in the spectral response and are neglected in implicit approaches, are further characterized and quantified with natural bond orbital methods. Our calculations show that simulated spectra, and especially ECD, are in good agreement with experiments solely when conformational and configurational dynamics, mutual polarization, and solute-solvent repulsion effects are considered.

Gómez, S., Ambrosetti, M., Giovannini, T., Cappelli, C. (2024). Close-Up Look at Electronic Spectroscopic Signatures of Common Pharmaceuticals in Solution. JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL, 128(10), 2432-2446 [10.1021/acs.jpcb.3c07795].

Close-Up Look at Electronic Spectroscopic Signatures of Common Pharmaceuticals in Solution

Giovannini, Tommaso;
2024-01-01

Abstract

Simulating electronic properties and spectral signals requires robust computational approaches that need tuning with the system’s peculiarities. In this paper, we test implicit and fully atomistic solvation models for the calculation of UV-vis and electronic circular dichroism (ECD) spectra of two pharmaceutically relevant molecules, namely, (2S)-captopril and (S)-naproxen, dissolved in aqueous solution. Room temperature molecular dynamics simulations reveal that these two drugs establish strong contacts with the surrounding solvent molecules via hydrogen bonds. Such specific interactions, which play a major role in the spectral response and are neglected in implicit approaches, are further characterized and quantified with natural bond orbital methods. Our calculations show that simulated spectra, and especially ECD, are in good agreement with experiments solely when conformational and configurational dynamics, mutual polarization, and solute-solvent repulsion effects are considered.
2024
Pubblicato
Rilevanza internazionale
Articolo
Esperti anonimi
Settore PHYS-04/A - Fisica teorica della materia, modelli, metodi matematici e applicazioni
English
Con Impact Factor ISI
Circular dichroism spectroscopy; Molecules; QM/MM; Solution chemistry; Solvents
Gómez, S., Ambrosetti, M., Giovannini, T., Cappelli, C. (2024). Close-Up Look at Electronic Spectroscopic Signatures of Common Pharmaceuticals in Solution. JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL, 128(10), 2432-2446 [10.1021/acs.jpcb.3c07795].
Gómez, S; Ambrosetti, M; Giovannini, T; Cappelli, C
Articolo su rivista
File in questo prodotto:
File Dimensione Formato  
gómez-et-al-2024-close-up-look-at-electronic-spectroscopic-signatures-of-common-pharmaceuticals-in-solution.pdf

solo utenti autorizzati

Tipologia: Versione Editoriale (PDF)
Licenza: Copyright dell'editore
Dimensione 5.55 MB
Formato Adobe PDF
5.55 MB Adobe PDF   Visualizza/Apri   Richiedi una copia
2024_JPCB_ECD_DISREP.pdf

embargo fino al 27/02/2025

Descrizione: accepted
Tipologia: Documento in Post-print
Licenza: Non specificato
Dimensione 14.94 MB
Formato Adobe PDF
14.94 MB Adobe PDF   Visualizza/Apri   Richiedi una copia

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/393346
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 3
  • ???jsp.display-item.citation.isi??? 3
social impact