background: we aimed at evaluating the temporal trend of drug-resistance and APOBEC editing from HIV-DNA genotypic resistance tests (GRT) in virologically suppressed individuals. material and methods: major resistance mutations (MRM), genotypic susceptibility score (GSS) for the current regimen and APOBEC-related mutations (APO-M) were evaluated. potential changes in trends of MRM and APO-M over-time were assessed and predictors of MRM detection or sub-optimal GSS (GSS<2) at HIV-DNA-GRT were estimated through logistic regression analyses.Results: Among the 1126 individuals included, 396 (35.2%) harboured at least one MRM (23.4% to NRTI, 18.8% to NNRTI, 7.7% to PI and 1.4% to INSTI [N=724]); 132 (12.3%) individuals showed a GSS <2. APO-M and stop codons were found in 229 (20.3%) and 105 (9.3%) individuals, respectively. APO-DRMs were found in 16.8% of individuals and were more likely observed in those individuals with stop codons (40.0%) compared to those without (14.4%, P<0.001). From 2010 to 2021 no significant changes of resistance or APO-M were found. positive predictors of MRM detection at HIV-DNA GRT were drug abuse, subtype B infection, and a prolonged and complex treatment history. perinatal infection and having at least 2 stop codons were associated with a current suboptimal regimen. conclusions: In virologically suppressed individuals, resistance in HIV-DNA and the extent of APOBEC editing were generally stable in the last decade. a careful evaluation of APOBEC editing might be helpful to improve the reliability of HIV-DNA GRT. further investigations are required to understand how to apply the estimation of APOBEC editing in refining genotypic evaluation.

Armenia, D., Gagliardini, R., Alteri, C., Svicher, V., Cento, V., Borghi, V., et al. (2023). Temporal trend of drug-resistance and APOBEC editing in PBMC genotypic resistance tests from HIV-1 infected virologically suppressed individuals. JOURNAL OF CLINICAL VIROLOGY, 168 [10.1016/j.jcv.2023.105551].

Temporal trend of drug-resistance and APOBEC editing in PBMC genotypic resistance tests from HIV-1 infected virologically suppressed individuals

Armenia, D;Alteri, C;Svicher, V;Cento, V;Fabeni, L;Bertoli, A;Brugneti, M;Malagnino, V;Andreoni, M;Ceccherini-Silberstein, F
2023-11-01

Abstract

background: we aimed at evaluating the temporal trend of drug-resistance and APOBEC editing from HIV-DNA genotypic resistance tests (GRT) in virologically suppressed individuals. material and methods: major resistance mutations (MRM), genotypic susceptibility score (GSS) for the current regimen and APOBEC-related mutations (APO-M) were evaluated. potential changes in trends of MRM and APO-M over-time were assessed and predictors of MRM detection or sub-optimal GSS (GSS<2) at HIV-DNA-GRT were estimated through logistic regression analyses.Results: Among the 1126 individuals included, 396 (35.2%) harboured at least one MRM (23.4% to NRTI, 18.8% to NNRTI, 7.7% to PI and 1.4% to INSTI [N=724]); 132 (12.3%) individuals showed a GSS <2. APO-M and stop codons were found in 229 (20.3%) and 105 (9.3%) individuals, respectively. APO-DRMs were found in 16.8% of individuals and were more likely observed in those individuals with stop codons (40.0%) compared to those without (14.4%, P<0.001). From 2010 to 2021 no significant changes of resistance or APO-M were found. positive predictors of MRM detection at HIV-DNA GRT were drug abuse, subtype B infection, and a prolonged and complex treatment history. perinatal infection and having at least 2 stop codons were associated with a current suboptimal regimen. conclusions: In virologically suppressed individuals, resistance in HIV-DNA and the extent of APOBEC editing were generally stable in the last decade. a careful evaluation of APOBEC editing might be helpful to improve the reliability of HIV-DNA GRT. further investigations are required to understand how to apply the estimation of APOBEC editing in refining genotypic evaluation.
nov-2023
Pubblicato
Rilevanza internazionale
Articolo
Sì, ma tipo non specificato
Settore MED/07
English
APOBEC editing
Drug-resistance
Genotypic susceptibility score
HIV-DNA GRT
PBMCs
Virological suppression
Armenia, D., Gagliardini, R., Alteri, C., Svicher, V., Cento, V., Borghi, V., et al. (2023). Temporal trend of drug-resistance and APOBEC editing in PBMC genotypic resistance tests from HIV-1 infected virologically suppressed individuals. JOURNAL OF CLINICAL VIROLOGY, 168 [10.1016/j.jcv.2023.105551].
Armenia, D; Gagliardini, R; Alteri, C; Svicher, V; Cento, V; Borghi, V; Vergori, A; Cicalini, S; Forbici, F; Fabeni, L; Bertoli, A; Brugneti, M; Genna...espandi
Articolo su rivista
File in questo prodotto:
Non ci sono file associati a questo prodotto.

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/356972
Citazioni
  • ???jsp.display-item.citation.pmc??? 1
  • Scopus 3
  • ???jsp.display-item.citation.isi??? 3
social impact