We present a method for the systematic identification of picogram quantities of new lipids in total extracts of tissues and fluids. It relies on the modularity of lipid structures and applies all-ions fragmentation LC-MS/MS and Arcadiate software to recognize individual modules originating from the same lipid precursor of known or assumed structure. In this way it alleviates the need to recognize and fragment very low abundant precursors of novel molecules in complex lipid extracts. In a single analysis of rat kidney extract the method identified 58 known and discovered 74 novel endogenous endocannabinoids and endocannabinoid-related molecules, including a novel class of N-acylaspartates that inhibit Hedgehog signaling while having no impact on endocannabinoid receptors.

Bilgin, M., Born, P., Fezza, F., Heimes, M., Mastrangelo, N., Wagner, N., et al. (2016). Lipid Discovery by Combinatorial Screening and Untargeted LC-MS/MS. SCIENTIFIC REPORTS, 6, 27920 [10.1038/srep27920].

Lipid Discovery by Combinatorial Screening and Untargeted LC-MS/MS

Fezza, Filomena;Mastrangelo, Nicolina;Maccarrone, Mauro;
2016-01-01

Abstract

We present a method for the systematic identification of picogram quantities of new lipids in total extracts of tissues and fluids. It relies on the modularity of lipid structures and applies all-ions fragmentation LC-MS/MS and Arcadiate software to recognize individual modules originating from the same lipid precursor of known or assumed structure. In this way it alleviates the need to recognize and fragment very low abundant precursors of novel molecules in complex lipid extracts. In a single analysis of rat kidney extract the method identified 58 known and discovered 74 novel endogenous endocannabinoids and endocannabinoid-related molecules, including a novel class of N-acylaspartates that inhibit Hedgehog signaling while having no impact on endocannabinoid receptors.
2016
Pubblicato
Rilevanza internazionale
Articolo
Esperti anonimi
Settore BIO/10 - BIOCHIMICA
English
Animals; Chromatography, Liquid; Endocannabinoids; Kidney; Lipids; Rats; Software; Tandem Mass Spectrometry
Bilgin, M., Born, P., Fezza, F., Heimes, M., Mastrangelo, N., Wagner, N., et al. (2016). Lipid Discovery by Combinatorial Screening and Untargeted LC-MS/MS. SCIENTIFIC REPORTS, 6, 27920 [10.1038/srep27920].
Bilgin, M; Born, P; Fezza, F; Heimes, M; Mastrangelo, N; Wagner, N; Schultz, C; Maccarrone, M; Eaton, S; Nadler, A; Wilm, M; Shevchenko, A
Articolo su rivista
File in questo prodotto:
File Dimensione Formato  
Bilgin et al., 2016.pdf

solo utenti autorizzati

Tipologia: Versione Editoriale (PDF)
Licenza: Copyright dell'editore
Dimensione 646.97 kB
Formato Adobe PDF
646.97 kB Adobe PDF   Visualizza/Apri   Richiedi una copia

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/246923
Citazioni
  • ???jsp.display-item.citation.pmc??? 5
  • Scopus 10
  • ???jsp.display-item.citation.isi??? 10
social impact