By using multiple molecular dynamics trajectories of photolyzed carbon monoxide (CO) within crystallized myoglobin, a quantitative description of CO diffusion and corresponding kinetics was obtained. Molecular dynamics results allowed us to construct a detailed kinetic model of the migration process, shedding light on the kinetic mechanism and relevant steps of CO migration and remarkably-well reproducing the available experimental data as provided by time-resolved Laue x-ray diffraction.

Anselmi, M., Nola, A., Amadei, A. (2008). The kinetics of ligand migration in crystallized myoglobin as revealed by molecular dynamics simulations. BIOPHYSICAL JOURNAL, 94(11), 4277-4281 [10.1529/biophysj.107.124529].

The kinetics of ligand migration in crystallized myoglobin as revealed by molecular dynamics simulations

AMADEI, ANDREA
2008-01-01

Abstract

By using multiple molecular dynamics trajectories of photolyzed carbon monoxide (CO) within crystallized myoglobin, a quantitative description of CO diffusion and corresponding kinetics was obtained. Molecular dynamics results allowed us to construct a detailed kinetic model of the migration process, shedding light on the kinetic mechanism and relevant steps of CO migration and remarkably-well reproducing the available experimental data as provided by time-resolved Laue x-ray diffraction.
2008
Pubblicato
Rilevanza internazionale
Articolo
Sì, ma tipo non specificato
Settore CHIM/02 - CHIMICA FISICA
English
Con Impact Factor ISI
carbon dioxide; carboxymyoglobin; hemoglobin; ligand; myoglobin; article; binding site; chemical model; chemical structure; chemistry; computer simulation; crystallization; kinetics; motion; protein binding; protein conformation; Binding Sites; Carbon Dioxide; Computer Simulation; Crystallization; Hemoglobins; Kinetics; Ligands; Models, Chemical; Models, Molecular; Motion; Myoglobin; Protein Binding; Protein Conformation
Anselmi, M., Nola, A., Amadei, A. (2008). The kinetics of ligand migration in crystallized myoglobin as revealed by molecular dynamics simulations. BIOPHYSICAL JOURNAL, 94(11), 4277-4281 [10.1529/biophysj.107.124529].
Anselmi, M; Nola, A; Amadei, A
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/23445
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