Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to improvement in human health, agriculture and the environment. In support of these discoveries, a plethora of databases and tools are deployed, in technically complex and diverse implementations, across a spectrum of scientific disciplines. The corpus of documentation of these resources is fragmented across the Web, with much redundancy, and has lacked a common standard of information. The outcome is that scientists must often struggle to find, understand, compare and use the best resources for the task at hand.Here we present a community-driven curation effort, supported by ELIXIR-the European infrastructure for biological information-that aspires to a comprehensive and consistent registry of information about bioinformatics resources. The sustainable upkeep of this Tools and Data Services Registry is assured by a curation effort driven by and tailored to local needs, and shared amongst a network of engaged partners.As of September 2015, the registry includes 1633 resources, with depositions from 91 individual registrations including 40 institutional providers and 51 individuals. With community support, the registry can become a standard for dissemination of information about bioinformatics resources: we welcome everyone to join us in this common endeavour. The registry is freely available at https://bio.tools.

Ison, J., Rapacki, K., Ménager, H., Kalaš, M., Rydza, E., Chmura, P., et al. (2015). Tools and data services registry: a community effort to document bioinformatics resources. NUCLEIC ACIDS RESEARCH, gkv1116 [10.1093/nar/gkv1116].

Tools and data services registry: a community effort to document bioinformatics resources

CESARENI, GIOVANNI;HELMER CITTERICH, MANUELA;LICATA, LUANA;
2015-11-03

Abstract

Life sciences are yielding huge data sets that underpin scientific discoveries fundamental to improvement in human health, agriculture and the environment. In support of these discoveries, a plethora of databases and tools are deployed, in technically complex and diverse implementations, across a spectrum of scientific disciplines. The corpus of documentation of these resources is fragmented across the Web, with much redundancy, and has lacked a common standard of information. The outcome is that scientists must often struggle to find, understand, compare and use the best resources for the task at hand.Here we present a community-driven curation effort, supported by ELIXIR-the European infrastructure for biological information-that aspires to a comprehensive and consistent registry of information about bioinformatics resources. The sustainable upkeep of this Tools and Data Services Registry is assured by a curation effort driven by and tailored to local needs, and shared amongst a network of engaged partners.As of September 2015, the registry includes 1633 resources, with depositions from 91 individual registrations including 40 institutional providers and 51 individuals. With community support, the registry can become a standard for dissemination of information about bioinformatics resources: we welcome everyone to join us in this common endeavour. The registry is freely available at https://bio.tools.
3-nov-2015
Online ahead of print
Rilevanza internazionale
Articolo
Esperti anonimi
Settore BIO/11 - BIOLOGIA MOLECOLARE
Settore BIO/18 - GENETICA
English
Con Impact Factor ISI
http://nar.oxfordjournals.org/content/early/2015/11/03/nar.gkv1116.long
Ison, J., Rapacki, K., Ménager, H., Kalaš, M., Rydza, E., Chmura, P., et al. (2015). Tools and data services registry: a community effort to document bioinformatics resources. NUCLEIC ACIDS RESEARCH, gkv1116 [10.1093/nar/gkv1116].
Ison, J; Rapacki, K; Ménager, H; Kalaš, M; Rydza, E; Chmura, P; Anthon, C; Beard, N; Berka, K; Bolser, D; Booth, T; Bretaudeau, A; Brezovsky, J; Casadio, R; Cesareni, G; Coppens, F; Cornell, M; Cuccuru, G; Davidsen, K; Vedova, G; Dogan, T; Doppelt Azeroual, O; Emery, L; Gasteiger, E; Gatter, T; Goldberg, T; Grosjean, M; Grüning, B; HELMER CITTERICH, M; Ienasescu, H; Ioannidis, V; Jespersen, M; Jimenez, R; Juty, N; Juvan, P; Koch, M; Laibe, C; Li, J; Licata, L; Mareuil, F; Mičetić, I; Friborg, R; Moretti, S; Morris, C; Möller, S; Nenadic, A; Peterson, H; Profiti, G; Rice, P; Romano, P; Roncaglia, P; Saidi, R; Schafferhans, A; Schwämmle, V; Smith, C; Sperotto, M; Stockinger, H; Vařeková, R; Tosatto, S; de la Torre, V; Uva, P; Via, A; Yachdav, G; Zambelli, F; Vriend, G; Rost, B; Parkinson, H; Løngreen, P; Brunak, S
Articolo su rivista
File in questo prodotto:
File Dimensione Formato  
Ison_etal_2015.pdf

accesso aperto

Licenza: Non specificato
Dimensione 755.83 kB
Formato Adobe PDF
755.83 kB Adobe PDF Visualizza/Apri

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/124592
Citazioni
  • ???jsp.display-item.citation.pmc??? 51
  • Scopus 100
  • ???jsp.display-item.citation.isi??? 75
social impact