Psoriasis is a common inflammatory skin disease with a prevalence of 2-3% in individuals of European ancestry(1). In a genome-wide search for copy number variants (CNV) using a sample pooling approach, we have identified a deletion comprising LCE3B and LCE3C, members of the late cornified envelope (LCE) gene cluster(2). The absence of LCE3B and LCE3C (LCE3C_LCE3B-del) is significantly associated (P = 1.38E-08) with risk of psoriasis in 2,831 samples from Spain, The Netherlands, Italy and the United States, and in a family-based study (P = 5.4E-04). LCE3C_LCE3B-del is tagged by rs4112788 (r(2) = 0.93), which is also strongly associated with psoriasis (P < 6.6E-09). LCE3C_LCE3B-del shows epistatic effects with the HLA-Cw6 allele on the development of psoriasis in Dutch samples and multiplicative effects in the other samples. LCE expression can be induced in normal epidermis by skin barrier disruption and is strongly expressed in psoriatic lesions, suggesting that compromised skin barrier function has a role in psoriasis susceptibility.

De Cid, R., Riveira Munoz, E., Zeeuwen, P., Robarge, J., Liao, W., Dannhauser, E., et al. (2009). Deletion of the late cornified envelope LCE3B and LCE3C genes as a susceptibility factor for psoriasis. NATURE GENETICS, 41(2), 211-215 [10.1038/ng.313].

Deletion of the late cornified envelope LCE3B and LCE3C genes as a susceptibility factor for psoriasis

GIARDINA, EMILIANO;NOVELLI, GIUSEPPE;
2009-01-01

Abstract

Psoriasis is a common inflammatory skin disease with a prevalence of 2-3% in individuals of European ancestry(1). In a genome-wide search for copy number variants (CNV) using a sample pooling approach, we have identified a deletion comprising LCE3B and LCE3C, members of the late cornified envelope (LCE) gene cluster(2). The absence of LCE3B and LCE3C (LCE3C_LCE3B-del) is significantly associated (P = 1.38E-08) with risk of psoriasis in 2,831 samples from Spain, The Netherlands, Italy and the United States, and in a family-based study (P = 5.4E-04). LCE3C_LCE3B-del is tagged by rs4112788 (r(2) = 0.93), which is also strongly associated with psoriasis (P < 6.6E-09). LCE3C_LCE3B-del shows epistatic effects with the HLA-Cw6 allele on the development of psoriasis in Dutch samples and multiplicative effects in the other samples. LCE expression can be induced in normal epidermis by skin barrier disruption and is strongly expressed in psoriatic lesions, suggesting that compromised skin barrier function has a role in psoriasis susceptibility.
2009
Pubblicato
Rilevanza internazionale
Articolo
Sì, ma tipo non specificato
Settore MED/03 - GENETICA MEDICA
English
DNA; allele; article; contingent negative variation; controlled study; disease association; disease course; epidermis; family study; gene; gene cluster; gene deletion; gene disruption; gene expression; gene induction; genetic epistasis; genetic risk; genetic susceptibility; genome; human; human tissue; Italy; keratinocyte; lce3b gene; lce3c gene; major clinical study; Netherlands; priority journal; psoriasis; skin biopsy; Spain; United States; Case-Control Studies; Cornified Envelope Proline-Rich Proteins; Epistasis, Genetic; Europe; Family; Gene Deletion; Genetic Predisposition to Disease; Genetics, Population; Genome-Wide Association Study; Genotype; HLA-C Antigens; Humans; Linkage Disequilibrium; Polymorphism, Single Nucleotide; Proteins; Psoriasis; United States
De Cid, R., Riveira Munoz, E., Zeeuwen, P., Robarge, J., Liao, W., Dannhauser, E., et al. (2009). Deletion of the late cornified envelope LCE3B and LCE3C genes as a susceptibility factor for psoriasis. NATURE GENETICS, 41(2), 211-215 [10.1038/ng.313].
De Cid, R; Riveira Munoz, E; Zeeuwen, P; Robarge, J; Liao, W; Dannhauser, E; Giardina, E; Stuart, P; Nair, R; Helms, C; Escaramis, G; Ballana, E; Martin Ezquerra, G; Heijer, M; Kamsteeg, M; Joosten, I; Eichler, E; Lazaro, C; Pujol, R; Armengol, L; Abecasis, G; Elder, J; Novelli, G; Armour, J; Kwok, P; Bowcock, A; Schalkwijk, J; Estivill, X
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/2108/39511
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